- Shen, H., Chou, J. J.: MemBrain: Improving the Accuracy of Predicting Transmembrane Helices. PLoS ONE, 3(6), e2399 (2008). PDF Available
- Schnell, J. R., Chou, J. J.: Structure and mechanism of the M2 proton channel of influenza A virus. Nature, 451(7178), 591-5 (2008). PDF Available
- Oxenoid, K., Rice, A. J., Chou, J. J.: Comparing the structure and dynamics of phospholamban pentamer in its unphosphorylated and pseudo-phosphorylated states. Protein Science, 16(9), 1977-83 (2007). PDF Available
- Douglas, S. M., Chou, J. J.*, Shih, W. M.*: DNA-nanotube-induced alignment of membrane proteins for NMR structure determination. Proc. Natl. Acad. Sci, 104(16), 6644-6648 (2007). PDF Available
- Call, M. E.*, Schnell, J. R.*, Xu, C., Lutz, R. A., Chou, J. J.*, Wucherpfennig, K. W.*: The Structure of the ζζ Transmembrane Dimer Reveals Features Essential for Its Assembly with the T Cell Receptor. Cell, 127(2), 355-368 (2006). PDF Available
- Potluri, S., Yan, A. K., Chou, J. J., Donald, B. R., Bailey-Kellogg, C.: Structure Determination of Symmetric Homo-Oligomers by a Complete Search of Symmetry Configuration Space, Using NMR Restraints and van der Waals Packing. PROTEINS: Structure, Function, and Bioinformatics, 65, 203-219 (2006). PDF Available
- Wei, R. R., Schnell, J. R., Larsen, N. A., Sorger, P. K., Chou, J. J., Harrison, S. C.: Structure of a central component of the yeast kinetochore: the Spc24p/Spc25p globular domain. Structure, 14(6), 1003-9 (2006). PDF Available
- Zweckstetter, M., Schnell, J. R., Chou, J. J.: Determination of the Packing Mode of the Coiled-coil Domain of cGMP-dependent Protein Kinase Ia in Solution Using Charge-Predicted Dipolar Couplings. J. Am. Chem. Soc., 127, 11918-9 (2005). PDF Available
- Schnell, J. R., Zhou, G., Zweckstetter, M., Rigby, A. C., Chou, J. J.: Rapid and Accurate Structure Determination of Coiled-coil Domains Using NMR Dipolar Couplings: Application to cGMP-dependent Protein Kinase Ia. Protein Science, 14(9), 2421-8 (2005). PDF Available
- Oxenoid, K., Chou, J. J.: The structure of phospholamban pentamer reveals a channel-like architecture in membranes. Proc. Natl. Acad. Sci., 102, 10870-10875 (2005). PDF Available
- Zhou, X., Chou, J. J.*, Wong, S. T.*: Protein Structure Similarity Analysis by Using Interaction Matrix Based Principle Component Correlation. BMC Bioinformatics., 7:40 (2006). PDF Available
- Wang, J. F., Schnell, J. R., Chou, J. J.: Amantadine partition and localization in phospholipids membrane: a solution NMR study. Biochem. Biophys. Research Comm., 324, 212-217 (2004). PDF Available
- Chou, J. J., Baber, J. L., Bax, A.: Characterization of phospholipids mixed micelles by translational diffusion. J. Biol. NMR, 29, 299-308 (2004). PDF Available
- Chou, J. J., Case, D., and Bax, A.: Insights in mobility of methyl-bearing sidechains in proteins from Jcc and Jcn couplings. J. Am. Chem. Soc., 125, 8959-8966 (2003). PDF Available
- Chou, J. J., Kaufman, J. D., Stahl, S. J., Wingfield, P. T., and Bax, A..: Micelle-Induced Curvature in a Water-Insoluble HIV-1 Env Peptide Revealed by NMR Dipolar Coupling Measurement in Stretched Polyacrylamide Gel. J. Am. Chem. Soc., 124, 2450-2451 (2002). PDF Available
- Chou, J. J., Li, S., Klee, C. B., and Bax, A.: Solution structure of Ca2+–calmodulin reveals flexible hand-like properties of its domains. Nature Structural Biology, 8, 990-997 (2001). PDF Available
- Chou, J. J. and Bax, A.: Protein Side-Chain Rotamers from Dipolar Couplings in a Liquid Crystalline Phase. J. Am. Chem. Soc., 123, 3844-3845 (2001).
- Bax, A., Chou, J. J., and Ramirez, B: Invited Review: Liquid Crystalline Samples: Application to Macromolecular Structure Determination. Methods in Enzymology (2001).
- Chou, J. J.*, Gaemers, S.*, Howder, B., Louis, J. M., and Bax, A.: A simple apparatus for generating stretched polyacrylamide gels, yielding uniform alignment of proteins and detergent micelles. J. Biol. NMR, 21, 377-382 (2001).
- Chou, J. J., Li, S., and Bax, A.: Study of Conformational Rearrangement and Refinement of Structural Homology Models by the Use of Heteronuclear Dipolar Couplings. J. Biol. NMR, 18, 217-227 (2000).
- Chou, J. J., Delaglio, F., and Bax, A.: Measurement of One-Bond 15N-13C’ Dipolar Couplings in Medium Sized Proteins. J. Biol. NMR, 18, 101-105 (2000).
- Chou, J. J., Li, H., Salvessen, G. S., Yuan, J., and Wagner, G.: Solution Structure of BID, an Intracellular Amplifier of Apoptotic Signaling. Cell, 96, 615-624 (1999).
- Zhou, P., Chou, J. J., Olea, R. S., Yuan, J., and Wagner, G.: Solution structure of Apaf-1 CARD and its interaction with caspase-9 CARD: A structural basis for specific adaptor/caspase interaction, Proc. Natl. Acad. Sci., 96, 11265-11270 (1999)
- Lugovskoy, A. A., Zhou, P., Chou, J. J., McCarty, J. S., Li, P., and Wagner, G.: Solution Structure of the CIDE-N Domain of CIDE-B and a Model for CIDE-N/CIDE-N Interactions in the DNA Fragmentation Pathway of Apoptosis. Cell, 99, 747–755 (1999).
- Chou, J. J., Matsuo, H., Duan, H., and Wagner, G.: Solution Structure of the RAIDD CARD Domain and Model for CARD/CARD Interaction in Caspase-2 and Caspase-9 Recruitment. Cell, 94, 171-180 (1998).
- Chou, J. J. and Shakhnovich, E. I.: A Study on Local-Global Cooperativity in Protein Collapse. J. Phys. Chem. B, 103, 2535-2542 (1999).
- Chou, J. J.: A Formulation for Correlating Properties of Peptides and Its Application to Predicting Human Immunodeficiency Virus Protease-Cleavable Sites in Proteins. Biopolymers, 33, 1405-1414 (1993).
- Chou, J. J.: Predicting Cleavability of Peptide Sequences by HIV Protease via Correlation-Angle Approach. J. Protein Chem., 12, 291-302 (1993).
- Chou, J. J. and Zhang, C.T.: A Joint Prediction of the Folding Types of 1490 Human Proteins from their Genetic Codons. J. Theor. Biol., 161, 251-262 (1993).
- Althaus, I. W., Chou, J. J., Gonzales, A. J., Deibel, M. R., Chou, K. C., Kezdy, F. J., Romero, D. L., Aristoff, P. A., Tarpley, W. G., and Reusser, F.: Steady-state Kinetic Studies with the Non-nucleoside HIV-1 Reverse Transcriptase Inhibitor U-87201E. J. Biol. Chem., 268, 6119-6124 (1993).
- Althaus, I. W., Chou, J. J., Gonzales, A. J., Deibel, M. R., Chou, K. C., Kezdy, F. J., Romero, D. L., Palmer, J. R., Thomas, R. C., Aristoff, P. A., Tarpley, W. G., and Reusser, F.: Kinetic Studies with the Non-nucleoside HIV-1 Reverse Transcriptase Inhibitor U-88204E. Biochemistry, 32, 6548-6554 (1993).
- Althaus, I. W., Gonzales, A. J., Chou, J. J., Romero, D. L., Deibel, M. R., Chou, K. C., Kezdy, F. J., Rensnick, L., Busso, M. E., So, A. G., Downey, K. M., Thomas, R. C., Aristoff, P. A., Tarpley, W. G., and Reusser, F.: The Quinoline U-78036 is a Potent Inhibitor of HIV-1 Reverse Transcriptase. J. Biol. Chem., 268, 14875-14880 (1993).
©2005
Chou Research Group