^ - equal contribution authors * - co-corresponding authors
- Wang J, Pielak RM, McClintock MA, Chou JJ: Solution structure and functional analysis of the influenza B proton channel. Nature Struct Mol Biol, Nov, (2009).
- Pielak RM^, Schnell JR^*, Chou JJ*: Mechanism of drug inhibition and drug resistance of influenza A M2 channel. Proc Natl Acad Sci, 106(18):7379-84 (2009). PDF, Supp Info
- Yoon MK^, Venkatachalam V^, Huang A, Choi BS*, Stultz CM*, Chou JJ*: Residual structure within the disordered C-terminal segment of p21Waf1/Cip1/Sdi1 and its implications for molecular recognition. Protein Science, 18(2), 337-347 (2008).
- Xu C^, Gagnon E^, Call ME, Schnell JR, Schwieters CD, Carman CV, Chou JJ*, Wucherpfennig KW*: Regulation of T Cell Receptor Activation by Dynamic Membrane Binidng of the CD3e Cytoplasmic Tyrosine-Based Motif. Cell, 135(4), 702-713 (2008). PDF
- Sharma AK, Zhou GP, Kupferman J, Surks HK, Christensen EN, Chou JJ, Mendelsohn ME, Rigby AC: Probing the interaction between the coiled coil leucine zipper of cGMP-dependent protein kinase Ialpha and the C terminus of the myosin binding subunit of the myosin light chain phosphatase. J Biol Chem, 283(47):32860-9 (2008).
- Shen H, Chou JJ: MemBrain: Improving the Accuracy of Predicting Transmembrane Helices. PLoS ONE, 3(6), e2399 (2008). PDF Available
- Schnell JR, Chou JJ: Structure and mechanism of the M2 proton channel of influenza A virus. Nature, 451(7178), 591-5 (2008). PDF Available
- Oxenoid K, Rice AJ, Chou JJ: Comparing the structure and dynamics of phospholamban pentamer in its unphosphorylated and pseudo-phosphorylated states. Protein Science, 16(9), 1977-83 (2007). PDF Available
- Douglas SM, Chou JJ*, Shih WM*: DNA-nanotube-induced alignment of membrane proteins for NMR structure determination. Proc. Natl. Acad. Sci, 104(16), 6644-6648 (2007). PDF Available
- Mansy SS, Zhang J, Kummerle R, Nilsson M, Chou JJ, Szostak JW, Chaput JC: Structure and evolutionary analysis of a non-biological ATP-binding protein. J Mol Biol, 371, 501-13 (2007).
- Kubat JA, Chou JJ, Rovnyak D: Nonuniform sampling and maximum entropy reconstruction applied to the accurate measurement of residual dipolar couplings. J Magn Reson, 186, 201-11, (2007).
- Call ME^, Schnell JR^, Xu C, Lutz RA, Chou JJ*, Wucherpfennig KW*: The Structure of the ζζ Transmembrane Dimer Reveals Features Essential for Its Assembly with the T Cell Receptor. Cell, 127(2), 355-368 (2006). PDF Available
- Potluri S, Yan AK, Chou JJ, Donald BR, Bailey-Kellogg C: Structure Determination of Symmetric Homo-Oligomers by a Complete Search of Symmetry Configuration Space, Using NMR Restraints and van der Waals Packing. PROTEINS: Structure, Function, and Bioinformatics, 65, 203-219 (2006). PDF Available
- Wei RR, Schnell JR, Larsen NA, Sorger PK, Chou JJ, Harrison SC: Structure of a central component of the yeast kinetochore: the Spc24p/Spc25p globular domain. Structure, 14(6), 1003-9 (2006). PDF Available
- Carothers JM, Davis JH, Chou JJ, Szostak JW: Solution structure of an informationally complex high-affinity RNA aptamer to GTP. RNA, 12, 567-79 (2006).
- Zweckstetter M, Schnell JR, Chou JJ: Determination of the Packing Mode of the Coiled-coil Domain of cGMP-dependent Protein Kinase Ia in Solution Using Charge-Predicted Dipolar Couplings. J. Am. Chem. Soc., 127, 11918-9 (2005). PDF Available
- Schnell, J. R., Zhou, G., Zweckstetter, M., Rigby, A. C., Chou, J. J.: Rapid and Accurate Structure Determination of Coiled-coil Domains Using NMR Dipolar Couplings: Application to cGMP-dependent Protein Kinase Ia. Protein Science, 14(9), 2421-8 (2005). PDF Available
- Oxenoid K, Chou JJ: The structure of phospholamban pentamer reveals a channel-like architecture in membranes. Proc. Natl. Acad. Sci., 102, 10870-10875 (2005). PDF Available
- Zhou X, Chou JJ*, Wong ST*: Protein Structure Similarity Analysis by Using Interaction Matrix Based Principle Component Correlation. BMC Bioinformatics., 7:40 (2006). PDF Available
- Wang JF, Schnell JR, Chou JJ: Amantadine partition and localization in phospholipids membrane: a solution NMR study. Biochem. Biophys. Research Comm., 324, 212-217 (2004). PDF Available
- Chou JJ, Baber JL, Bax A: Characterization of phospholipids mixed micelles by translational diffusion. J. Biol. NMR, 29, 299-308 (2004). PDF Available
- Chou JJ, Case D, Bax A: Insights in mobility of methyl-bearing sidechains in proteins from Jcc and Jcn couplings. J. Am. Chem. Soc., 125, 8959-8966 (2003). PDF Available
- Chou JJ, Kaufman JD, Stahl SJ, Wingfield PT, Bax A: Micelle-Induced Curvature in a Water-Insoluble HIV-1 Env Peptide Revealed by NMR Dipolar Coupling Measurement in Stretched Polyacrylamide Gel. J. Am. Chem. Soc., 124, 2450-2451 (2002). PDF Available
- Chou JJ, Li S, Klee CB, Bax A: Solution structure of Ca2+–calmodulin reveals flexible hand-like properties of its domains. Nature Structural Biology, 8, 990-997 (2001). PDF Available
- Chou JJ, Bax A: Protein Side-Chain Rotamers from Dipolar Couplings in a Liquid Crystalline Phase. J. Am. Chem. Soc., 123, 3844-3845 (2001).
- Bax A, Chou JJ, Ramirez B: Invited Review: Liquid Crystalline Samples: Application to Macromolecular Structure Determination. Methods in Enzymology (2001).
- Chou JJ^, Gaemers S^, Howder B, Louis JM, Bax A: A simple apparatus for generating stretched polyacrylamide gels, yielding uniform alignment of proteins and detergent micelles. J. Biol. NMR, 21, 377-382 (2001).
- Chou JJ, Li S, Bax A: Study of Conformational Rearrangement and Refinement of Structural Homology Models by the Use of Heteronuclear Dipolar Couplings. J. Biol. NMR, 18, 217-227 (2000).
- Chou JJ, Delaglio F, Bax A: Measurement of One-Bond 15N-13C’ Dipolar Couplings in Medium Sized Proteins. J. Biol. NMR, 18, 101-105 (2000).
- Chou JJ, Li H, Salvessen GS, Yuan J, Wagner G: Solution Structure of BID, an Intracellular Amplifier of Apoptotic Signaling. Cell, 96, 615-624 (1999).
- Zhou P, Chou JJ, Olea RS, Yuan J, Wagner G: Solution structure of Apaf-1 CARD and its interaction with caspase-9 CARD: A structural basis for specific adaptor/caspase interaction, Proc. Natl. Acad. Sci., 96, 11265-11270 (1999)
- Lugovskoy AA, Zhou P, Chou JJ, McCarty JS, Li P, Wagner G: Solution Structure of the CIDE-N Domain of CIDE-B and a Model for CIDE-N/CIDE-N Interactions in the DNA Fragmentation Pathway of Apoptosis. Cell, 99, 747–755 (1999).
- Chou JJ, Matsuo H, Duan H, Wagner G: Solution Structure of the RAIDD CARD Domain and Model for CARD/CARD Interaction in Caspase-2 and Caspase-9 Recruitment. Cell, 94, 171-180 (1998).
- Chou JJ, Shakhnovich EI: A Study on Local-Global Cooperativity in Protein Collapse. J. Phys. Chem. B, 103, 2535-2542 (1999).
- Chou JJ: A Formulation for Correlating Properties of Peptides and Its Application to Predicting Human Immunodeficiency Virus Protease-Cleavable Sites in Proteins. Biopolymers, 33, 1405-1414 (1993).
- Chou JJ: Predicting Cleavability of Peptide Sequences by HIV Protease via Correlation-Angle Approach. J. Protein Chem., 12, 291-302 (1993).
- Chou JJ, Zhang CT: A Joint Prediction of the Folding Types of 1490 Human Proteins from their Genetic Codons. J. Theor. Biol., 161, 251-262 (1993).
- Althaus IW, Chou JJ, Gonzales AJ, Deibel MR, Chou KC, Kezdy FJ, Romero DL, Aristoff PA, Tarpley WG, Reusser F: Steady-state Kinetic Studies with the Non-nucleoside HIV-1 Reverse Transcriptase Inhibitor U-87201E. J Biol Chem., 268, 6119-6124 (1993).
- Althaus IW, Chou JJ, Gonzales AJ, Deibel MR, Chou KC, Kezdy FJ, Romero DL, Palmer JR, Thomas RC, Aristoff PA, Tarpley WG, Reusser F: Kinetic Studies with the Non-nucleoside HIV-1 Reverse Transcriptase Inhibitor U-88204E. Biochemistry, 32, 6548-6554 (1993).
- Althaus IW, Gonzales AJ, Chou JJ, Romero DL, Deibel MR, Chou KC, Kezdy FJ, Rensnick L, Busso ME, So AG, Downey KM, Thomas RC, Aristoff PA, Tarpley WG, Reusser F: The Quinoline U-78036 is a Potent Inhibitor of HIV-1 Reverse Transcriptase. J. Biol. Chem., 268, 14875-14880 (1993).